Managing your company’s finances can be difficult, which is why many businesses rely on accounting software to track money as it flows in and out of their accounts. Quality accounting programs include time-saving features that reduce how much manual data entry you have to do. Depending on the platform you choose, accounting software can make tasks like invoicing customers, recording payments and following up on past-due receivables much easier and faster.
While some accounting systems cover just the basics — letting you track what’s coming in and going out — others offer more advanced tools that automate work you’d otherwise handle manually. These can include things like bank feeds for daily data transfers, reconciliation and recurring invoicing. With the right accounting software, you can stay on top of your finances and avoid many of the common business accounting challenges that come with running a company.
What are the core features of accounting software?
Before committing to an accounting software provider, it’s important to understand which tools and features to look for. Most online accounting software covers the basics, helping you track money coming in and going out while keeping your records accurate. Some platforms go further, offering more advanced tools that automate tasks and give you deeper insight into your business finances.
Below are some of the core features you’ll find in most accounting software.
Accounts receivable (AR)
Accounting software should help you handle billing, track what customers owe and keep tabs on incoming payments. Here are some of the main accounts receivable (AR) features to look for:
- Invoice processing: At a minimum, your accounting software should let you create and send professional invoices. When money is owed to you, you need to know who owes it, how much and when payment is expected. Most systems let you print or email invoices and store basic customer details like names, addresses, account numbers and payment terms. Many platforms also save your standard pricing for products and services, which helps speed up repeat billing.
- Automated invoicing: This feature helps ensure invoices go out on time, so revenue isn’t delayed because something slipped through the cracks. Many platforms also send automated statements and payment reminders, acting as a built-in nudge for customers to pay.
If automated invoicing is a priority, check out our
FreshBooks review to see how one platform handles recurring invoices, reminders and client billing.
Accounts payable (AP)
Nobody likes paying bills, but keeping track of what you owe is essential for any business. Accounting software helps you manage the outflow of funds, though how these features work can vary by platform. Here are some of the most useful accounts payable (AP) features:
- Purchase orders (POs): Tracking purchases and managing what you owe is a core function of accounting software, but capabilities can range from creating simple POs to managing the entire process from quote to purchase to payment.
- Vendor credit memos: It’s easy to lose track of vendor credits from returns or rewards, but they add up quickly. Because these credits function much like cash, software that tracks them can help you stay on top of expenses and avoid overpaying.
- Automated payments: Many AP tools let you schedule bank transfers, direct deposits or check payments, helping you stay current on bills without having to manage each one manually.
- Vendor tax forms: Some platforms include support for forms like the 1099-NEC and 1099-MISC, which are used to report payments to contractors. When these forms are auto-populated and filed electronically, it can save time and help you stay compliant.
Payment processing
Many accounting systems let customers pay invoices online by clicking a button directly from the invoice you send them. For businesses, this can mean less time spent handling checks or making bank deposits, along with faster and more secure payments. However, there are costs involved. Expect to pay processing fees similar to standard credit card rates when your accounting software handles debit and credit card transactions.
Some systems also support ACH payments that are deposited directly into your bank account. This can make cash flow easier to manage (especially if you rely on recurring billing) because payments come in automatically instead of waiting on checks or bank runs. While there’s usually a fee for ACH transfers, it’s typically lower than card processing costs, which can make it a smart option if you run a subscription business or bill customers regularly.
Banking and account reconciliation
Any accounting software you decide on should connect to your business bank accounts so you can import transactions and track activity in real time. Many platforms also let you make direct payments and manage multiple accounts from one place, though capabilities can vary.
Business bank account reconciliation is a key part of this process. Your software should help you match transactions across accounts, keep your records accurate and maintain a clear general ledger. If you manage more than one account, this becomes even more important.
Look for these additional banking features:
- Bank deposit preparation: Most systems today support electronic deposits, but it’s still worth checking which payment types and ACH transfers your software actually handles.
- Check handling: If your business still relies on checks, your system should be able to print and process them without extra work. Features like check voiding and duplicate payment alerts can also help catch mistakes before they become a bigger issue.
Other core accounting software features
In addition to these primary functions, most accounting software includes a few foundational features that support how the system works behind the scenes, including the following:
- General ledger and chart of accounts: The general ledger is where all of your transactions live, recorded using double-entry accounting. Your chart of accounts organizes those entries into categories like income, expenses, assets and liabilities, so you can actually see how your business is performing.
- Integrations: Many accounting platforms connect with banks, payment processors and other business tools to keep data flowing automatically. These integrations can reduce manual entry and help ensure your financial data stays up to date.
- Mobile access: Many accounting platforms offer mobile apps that let you monitor activity, capture receipts and manage basic tasks on the go. While functionality can be more limited than the desktop version, mobile access makes it easier to stay connected to your finances day to day.
What are advanced accounting software features?
Many of the best accounting software platforms go beyond basic financial tracking, giving you tools to manage more complex parts of your business in one place. If you need that level of support, here are some advanced features worth considering.
Payroll
Some accounting platforms include robust payroll modules that can rival many of the best online payroll services. These tools can handle everything from calculating wages to filing payroll taxes and managing deductions. Here are some of the top payroll features to look for:
- Variable wage schedules: Whether employees are salaried or hourly, your system should be able to calculate what you owe them accurately. This becomes more important if you have part-time or seasonal staff working on different schedules — some weekly, others biweekly or monthly. Look for software that can handle multiple pay structures, including commissions, employee bonuses and benefits like health insurance and contributions to 401(k) plans and other retirement plan options.
- Direct deposit: Most employees expect to be paid via direct deposit. Your accounting software should make it easy to set up and schedule payments without extra steps.
- Automatic tax calculations: Capabilities range from handling basic deductions to managing more complex tax requirements. Some platforms calculate payroll taxes, generate required payroll forms and support filings like Form 941, W-2s and state tax reports. It’s worth checking what’s included so you’re not stuck handling those tasks manually later.
- Expense reimbursements and deductions: If employees submit reimbursable expenses, such as travel or meals, your system should track and process those payments while keeping everything aligned with tax requirements.
Taxes are a common pain point for small business owners. Many accounting platforms help ease the burden by calculating sales tax, managing
payroll deductions and supporting required tax filings.
Shipping
If your business regularly ships products — whether through couriers or directly to customers — accounting software with built-in shipping tools can save you from needing a separate system. Here are some features to look for:
- Shipping label printing: This can speed up your workflow by letting you generate labels alongside orders or invoices, instead of handling them separately.
- Shipping cost estimation: Some platforms factor in variables like weight and distance to estimate shipping costs. This helps you account for those expenses when setting prices or sending invoices.
- Shipment tracking: Integrations with courier tracking systems let you monitor shipments and give customers more accurate delivery updates.
- Drop shipping: If you ship products directly from a supplier or manufacturer, your accounting software should be able to handle those transactions without complicating your billing.
Inventory management
Accounting software with inventory management tools can help streamline your operations by giving you a clearer picture of what’s in stock, what needs to be reordered and where your purchasing budget is going. If you run a retail or product-based business, look for features like these:
- Inventory tracking: Being able to follow an item from purchase to sale — and all the way through fulfillment — helps you keep inventory levels accurate and avoid surprises.
- Inventory level controls: Many systems let you set minimum and maximum stock levels and automate reordering when inventory runs low. This helps you avoid running out of key items or overstocking products that don’t move.
- Stock locations: If you manage inventory across multiple locations, having those details built into your system can simplify order management and reduce the need for separate warehouse tools.
- Item images: Including product images can make it easier for teams to identify items and ensure the right products are picked and shipped.
Time and job tracking
Many businesses need to track employee time and monitor how long specific tasks or projects take. Some accounting platforms include built-in tools to handle this, while others rely on integrations. If this is important for your workflow, look for these capabilities:
- Time tracking: If you pay employees hourly or need them to clock in and out, accurate time tracking is essential for payroll. Many systems support time clocks that use swipe cards, PINs or mobile apps, and some even offer biometric authentication options.
- Job tracking: Service-based businesses often need to track how long individual jobs take to ensure accurate billing. This data can also help you refine service pricing and better understand where your time and costs are going.
- Job status: Being able to see which jobs are active, completed or on hold helps you stay organized and keep projects moving.
- Estimates: For many service businesses, estimates are part of the sales process. Some systems let you create estimates and quickly convert them into invoices, which can save time and reduce manual work.
What reporting options does accounting software offer?
Not all accounting software handles reporting the same way. Some platforms offer a wide range of reports with flexible customization options, while others stick to the basics. If reporting is important to your business, here are the features to look for.
- Standard reports: Your accounting system should be able to generate the core reports most businesses rely on, including income statements (i.e., profit and loss statements), balance sheets (business assets and liabilities), cash flow statements and summaries for accounts receivable, accounts payable and payroll.
- Customizable reports: Accounting software that supports customizable reporting lets you tailor reports to fit your needs. Look for tools that allow you to add or remove columns, adjust layouts and save custom reports so you can reuse them without rebuilding from scratch.
- Visual reports: Long lists of numbers can be hard to interpret. Platforms that turn data into charts, graphs and trend lines make it easier to spot patterns and understand where your money is going. Look for data visualization features like color coding and the ability to compare data across time periods.
- Forecasting and projections: Reports can help you identify trends, but some platforms go further by analyzing your data and generating forecasts. With built-in budgeting tools and scenario planning, you can use past performance to guide future decisions instead of relying on guesswork.
- Multi-entity reporting: If you manage multiple businesses or locations, reporting tools that consolidate financial data can give you a clearer view of overall performance. This makes it easier to compare results and understand how different parts of your business are contributing to the bigger picture.
What are the key benefits of accounting software?
Using accounting software can save time, reduce errors and give you a clearer picture of your financial health.
“The main benefit of using modern accounting software is efficiency,” said Fabien Dawidowicz, former chief financial officer of Spendesk. “Instead of copying and pasting data from spreadsheet to spreadsheet, you have all your transaction information in one place. You can easily see what’s been spent or what’s come into the business, and you always know where to find this information.”
By connecting your bank and credit card accounts, accounting software keeps your financial data up to date automatically. Instead of manually entering transactions, you can review and categorize activity as it comes in, which helps you stay organized and avoid mistakes.
“Using an accounting package will help organize your records and ‘force’ you into a systematic structure,” Ken Stalcup, senior director with Houlihan Valuation Advisors, told us. “That will put the company’s finances into a system that can report the financial results and help when it comes to tax time.”
If you’re deciding whether accounting software is worth the investment, here are some of the biggest advantages to consider:
- Stay on top of your finances: Accounting software keeps your financial data in one place, making it easier to track performance and understand where your business stands at any given time.
- Automate routine tasks: From invoicing to expense tracking, automation reduces manual work and helps prevent errors in your records.
- Improve cash flow visibility: With real-time updates and connected accounts, you can see what’s coming in and going out without waiting on end-of-month reports.
- Simplify tax preparation: Many platforms calculate taxes, organize records and generate the forms you need, which can make tax season far less stressful.
- Access reporting and insights: Built-in reports (such as AP reports) and dashboards help you analyze trends and make more informed decisions as your business grows.
- Work more efficiently with your accountant: When your records are organized and accessible in one system, it’s easier for your accountant to review your books and provide guidance without constant back-and-forth.
The power of accounting software
Moving beyond spreadsheets and disorganized records is just the start. Cloud-based accounting software pulls your financial data into one place, so you can see what’s going on with your cash flow and overall business health in real time. It also helps automate routine tasks like invoicing, expense categorization and payroll, so you’re spending less time on paperwork and more time running your business.
It can also make working with your accountant easier, since everything is organized and accessible. With fewer manual processes, there’s less room for errors, and your records tend to stay more consistent over time. With the right setup, accounting software can save you time, improve accuracy and help you make more confident decisions as your business grows.
Mike Berner and Simone Johnson contributed to this article. Source interviews were conducted for a previous version of this article.